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Yuanzhi Cheng's Projects

camoco icon camoco

Camoco is a fully-fledged software package for building co-expression networks and analyzing the overlap interactions among genes.

concat-r icon concat-r

Fast alignment concatenation package in R.

curatedtcgadata icon curatedtcgadata

Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects

deeplearning_summary icon deeplearning_summary

A curated list of awesome Deep Learning tutorials, projects and communities. Deep learning相关学习资料. Forked from other github repositories.

export icon export

R package for streamlined export of graphs and data tables.

httpgd icon httpgd

Asynchronous http server graphics device for R.

immunedeconv icon immunedeconv

A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter)

insct icon insct

scRNAseq integration with triplet neural networks

mecat icon mecat

MECAT: an ultra-fast mapping, error correction and de novo assembly tool for single-molecule sequencing reads

qtlseqr icon qtlseqr

QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis

sccatch icon sccatch

Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data

seqlim icon seqlim

Easy Manipulation of Multiple Sequence Alignments (Concatenation and Format Conversion)

trimal icon trimal

A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 1.4

tsv-utils-dlang icon tsv-utils-dlang

eBay's TSV utilities: Command line tools for large, tabular data files. Filtering, statistics, sampling, joins and more.

vditor icon vditor

♏ 一款浏览器端的 Markdown 编辑器，支持所见即所得（富文本）、即时渲染（类似 Typora）和分屏预览模式。An In-browser Markdown editor, support WYSIWYG (Rich Text), Instant Rendering (Typora-like) and Split View modes.

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