Comments (4)
Hi,
Could you detail a bit more about the issue and how did you come to the conclusion that Vina does not work? Thanks.
Jérôme.
from autodock-vina.
Hi,
I did the installation properly. But I get "Command 'vina' not found" error when I try to run it on terminal:
(vina) qasim@qasim:~$ vina -h
Command 'vina' not found, but can be installed with:
sudo apt install autodock-vina
from autodock-vina.
Hi,
Currently, the python bindings and the binary installation are two separate processes. The installation of the python bindings does not include the Vina executable, and vice versa (see warning
box at the beginning the installation instructions).
You can find the latest binaries here: https://github.com/ccsb-scripps/AutoDock-Vina/releases
Hope it helps.
Best,
Jerome.
from autodock-vina.
I have installed the python bindings of vina in google colab by using !pip install vina. I have also placed the binary in the content folder and Alias it. However, the python is not generating any output. Plz help.
from autodock-vina.
Related Issues (20)
- rdkit.six not found HOT 1
- Problems with Binary installation HOT 1
- Autogrid4 Unknown receptor type: HOT 1
- Vina runtime error: The ligand is outside the grid box HOT 1
- I am getting this error while doing flexible autodock docking HOT 1
- H-bond term HOT 2
- Flexible docking tutorial : no HD map file after autogrid4 HOT 1
- Differences between `*_rigid.pdbqt` and `*.pdbqt` files of receptors HOT 2
- Issue : An internal error occurred in ../../../src/lib/tree.h(101) HOT 3
- Problem in generation of some map files during flexible autodock docking. HOT 3
- Error on running prepare_flexreceptor.py for flexible docking HOT 8
- Charged ligands and receptors HOT 2
- FLexible Autodock HOT 1
- Method to capture receptor structure state after flexible docking HOT 7
- Virtual screening using Python bindings HOT 22
- Autodock Vina Scoring Functions HOT 3
- How to perform docking of drugs that contain metal ions?
- REMARK VINA RESULT not in PDBQT output of `--local_only` or `--score_only` type of calculations
- Zn docking-Chelation issue HOT 9
- An internal error occurred in ../../../src/lib/tree.h(101) HOT 3
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from autodock-vina.