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Jedidiah Carlson's Projects

archanc icon archanc

Benchmarking Methods for Detecting Archaic Admixture

cv icon cv

Sam Abbott's Curriculum Vitae

doomsayer icon doomsayer

Quality control for next-generation sequencing data

fermentrack-docker icon fermentrack-docker

A docker build process for the fermentrack project. See www.fermentrack.com for more information.

helmsman icon helmsman

highly-efficient & lightweight mutation signature matrix aggregation

lewontin icon lewontin

Scientometric analysis of Lewontin, 1972

mastodon icon mastodon

Your self-hosted, globally interconnected microblogging community

mudb icon mudb

jekyll code for mutation.sph.umich.edu

musigtools icon musigtools

convenience functions for compatibility between carjed/helmsman output and various mutation signature analysis packages

primeval icon primeval

common models of human demography, implemented in Python with msprime

r-cv icon r-cv

Programmatically-generated CV using the R vitae package. Originally forked from https://github.com/loreabad6/R-CV

stdpopsim icon stdpopsim

A library of standard simulation models for msprime

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