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automated_chimermarker_processing

Automated_Chimermarker_Processing

cgh2bed

Converts exported CGH data into a bed file summary

correlating-plasma-genotype-with-outcome-in-a-phase-ii-trial-of-docetaxel-with-or-without-the-hsp90-

Correlating the plasma genotype with outcomes in a phase II trial of docetaxel combined with the Hsp90 inhibitor ganetespib (GALAXY-1)

dip_pipeline

fcell_mega_rf

Predicting foetal haemoglobin levels using SNPs from an Illumina MEGA chip

gnomad_snp_backbone_wg

Finding SNPs between an AF of 0.45-0.7 in 100bp regions for every 0.5Mb chunk of the human genome

llgp_validation

nipt_sicklecell

Research work looking at NIPT for sickle cell disease

panel_validation

pkp_validation

predicting_hbf_rf

proteinnet

Protein Network Analysis

rosalind_problems

The problems from Rosalind at http://rosalind.info/problems/list-view/

slglh_exomedepth_kch

transcript_fetcher

twins

Analysing twins data

ucsc_exon_fetcher

WIP - pull out exon co-ordinates from UCSC .fa / refset intersection

uom_lrg_parser

A LRG parser by Graeme Smith and Callum Rakhit

variant_database

Django frontend for variant database

vpaneldb

ww1-casualties

WW1 casualty plots