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caitlinch Goto Github PK

followers: 5.0 following: 7.0 repos: 6.0 gists: 0.0

Name: Caitlin Cherryh

Type: User

Bio: PhD candidate (she/her) in phylogenetics (systematic bias/methods development) at the Australian National University. Likes baking and making things.

Twitter: CaitlinCherryh

Location: Canberra

Caitlin Cherryh's Projects

ancient_ils icon ancient_ils

Evaluating the impact of conflicting phylogenetic signal on hypotheses of early animal evolution by applying concordance factors

code-for-the-world icon code-for-the-world

A tutorial for Advanced Scientific Python Programming on organizing, documenting, and distributing code

gene_filtering icon gene_filtering

Investigating the impact of filtering putatively recombinant genes on phylogenetic inference. We quantify the difference in tree topology (both concatenated and summary coalescent methods) between trees with and without putatively recombinant genes, for 4 empirical phylogenetic datasets and 3 tests for recombination.

treelikeness icon treelikeness

Developing a statistic to test tree likeness and identify genes that don't fit the model.

treelikeness-metrics icon treelikeness-metrics

Benchmarking existing tests for treelikeness in phylogenetic data and introducing a new test for quantifying treelikeness, the tree proportion.

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