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bvieth avatar bvieth commented on June 3, 2024

Dear Xiuwei,

thank you for pointing that out. Since I did not update my dependencies recently, I missed the changes in DECENT that resulted in this installation error. I have updated powsimR accordingly and the new version 1.1.3 should work now.

Kind regards
Beate

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xiuweiz avatar xiuweiz commented on June 3, 2024

Thank you very much Beate!
Indeed, I can install and load powsimR now. Although I still get some warnings, I hope it doesn't affect running the simulation.

** testing if installed package can be loaded
Warning: replacing previous import ‘DECENT::lrTest’ by ‘MAST::lrTest’ when loading ‘powsimR’
Warning in rgl.init(initValue, onlyNULL) :
  RGL: unable to open X11 display
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Warning: replacing previous import ‘parallel::makeCluster’ by ‘snow::makeCluster’ when loading ‘powsimR’
Warning: replacing previous import ‘parallel::stopCluster’ by ‘snow::stopCluster’ when loading ‘powsimR’
Warning: replacing previous import ‘penalized::predict’ by ‘stats::predict’ when loading ‘powsimR’
Warning: replacing previous import ‘zinbwave::glmWeightedF’ by ‘zingeR::glmWeightedF’ when loading ‘powsimR’
* DONE (powsimR)

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bvieth avatar bvieth commented on June 3, 2024

Dear Xiuwei,

that looks good. Indeed there are some warnings because certain functions share the same name across implemented packages. But this should not be a problem.
I will close the issue for now. Feel free to reopen / start a new thread if you need any further assistance.

Kind regards
Beate

from powsimr.

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