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2023-scos icon 2023-scos

Communications Biology 2023 - Measuring human cerebral blood flow and brain function with fiber-based speckle contrast optical spectroscopy system

aflowoct icon aflowoct

calculate absolute cerebral blood flow from Doppler OCT measurements

angioreg icon angioreg

register two volumetric angiograms together using an affine transformation then corrected by non-linear scattered data interpolation

annotation_tools icon annotation_tools

MATLAB applications for myelin and cell annotation of qBRM and 2P images

atlasviewer icon atlasviewer

MATLAB application for imaging and reconstruction of fNIRS data on atlas anatomy

bpmresults icon bpmresults

Contains Results for the paper Cheng, Xiaojun, et al. "Development of a beam propagation method to simulate the point spread function degradation in scattering media." Optics letters 44.20 (2019): 4989-4992.https://www.osapublishing.org/ol/abstract.cfm?uri=ol-44-20-4989

dlsoct icon dlsoct

Dynamic Light Scattering-Optical Coherence Tomography data processing for blood flow velocity and diffusion coefficient measurement

g1octa icon g1octa

3D Optical Coherence Tomography Angiography for minimizing tail artifacts

homer3 icon homer3

MATLAB application for fNIRS data processing and visualization

imview3d icon imview3d

Legacy code for graphing vascular networks

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