boykovdn Goto Github PK

augmentor

Image augmentation library in Python for machine learning.

boykovdn.github.io

A simple website I use to play around with

cholespy

An easily integrable Cholesky solver on CPU and GPU

circles_from_edges

[WIP] This package aims to detect edges in RBCs and to fit a circular contour along the edge using an iterative algorithm.

confnets

dv-code

elf

Utils and convenience functions for large-scale bio-image analysis.

gpu-meanshift-segmentation

High Performance Computing on Graphics Processing Units, Mean Shift Image Segmentation

gpushift

Mean Shift on the GPU using PyKeOps and pytorch

graph-wavenet

graph wavenet

hello-world

greeting the world

ilastik

ilastik-shell, applets, and workflows to string them together.

inferno

A utility library around PyTorch

lazyflow

lazy parallel ondemand zero copy numpy array data flows with caching and dirty propagation

lightseg

openflexure_microscope

A 3D printable microscope and translation stage

openflexure_microscope_software

Python scripts to run the OpenFlexure Microscope

openpiv-python

OpenPIV is an open source Particle Image Velocimetry analysis software written in Python, Matlab and C++

part2project

Part II computational project (Surveying Telescopes) along with review article on plasmonics. Reference purposes.

physics-stuff

picamera

A pure Python interface to the Raspberry Pi camera module

plant-seg

A tool for cell instance aware segmentation in densely packed 3D volumetric images

project-john

Repository for whatever files we end up using for our project

python-temika-reader

A lightweight python class to read .movie files and do the basics

pytorch-unet

PyTorch implementation of the U-Net for image semantic segmentation with high quality images

pytorch_geometric_temporal

PyTorch Geometric Temporal: Spatiotemporal Signal Processing with Neural Machine Learning Models (CIKM 2021)

scipy

Scipy library main repository

summer-vibes

fun project for the summer

temika_xml_compiler

tools