bjstewart1 Goto Github PK
Name: Benjamin Stewart
Type: User
Bio: Biomedical research: comp bio, single-cell genomics, nephrology.
Twitter: drbstewart
Location: Cambridge, UK
Benjamin Stewart's Projects
63_immune_cells
Gene expression profiles of 63 immune cell types
embeddr
Pseudotemporal ordering of single-cell RNA-seq data using laplacian eigenmaps & principal curves
genotypemixtures
Stitches together genotype clusters from multiple Souporcell results over large single cell genomics experiments
helpful_singlecell
helpful_singlecell
hodgkin_lymphoma_analysis
hodgkin_lymphoma_analysis
infercnv
Inferring CNV from Single-Cell RNA-Seq
kidney_sc_immune
Repository for scRNAseq study of human kidneys
leiden
Implementation of the Leiden algorithm to be used with igraph called by reticulate in R.
pcamethods
Perform PCA on data with missing values in R
rvest
Simple web scraping for R
scran
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/scran.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=scran.
scsplit
Genotype-free demultiplexing of pooled single-cell RNAseq, using a hidden state model for identifying genetically distinct samples within a mixed population.
svdvis
:exclamation: This is a read-only mirror of the CRAN R package repository. svdvis — Singular Value Decomposition Visualization
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