biplabendu Goto Github PK

ant_ppi

In this repository we deposited the Supplementary data/script used in study "Genome-wide inference of Camponotus floridanus protein-protein interaction network using homologous mapping and interacting domain profile pairs".

ants

Stats from AntWiki

book

comparative-transcriptomics-of-ants

Comparative transcriptomics reveals the conserved regulatory building blocks involved in the maintenance and parallel evolution of caste and other phenotypic traits in ants

covid19_india

das_et_al_2021

das_et_al_2022a

Fungal parasites - Timecourse RNASeq

debekker_and_das_2021

code to build and annotate circadian GCNs

derby

Statistics for roller derby obtained from the WFTDA Statsbook.

empirical-jtk_cycle-with-asymmetry

This repository contains the code described in Hutchison, Maienschein-Cline, and Chiang et al. (2015) Improved statistical methods enable greater sensitivity in rhythm detection for genome-wide data. PLoS Comput Biol 11(3): e1004094. doi:10.1371/journal.pcbi.1004094

formica-methylation

Using RRBS to study caste and development stage-specific methylation in the ant Formica exscecta

gha-workflows

homepage

intro_r_workshop_2021

workshop for teaching R to undergrad students

limorhyde

LimoRhyde R package

manuscripts

my_dummy_website

A dummy website created using RMarkdown and hosted on GitHub pages

purrr-tutorial

Materials for getting to the know the R package purrr

python-machine-learning-book-2nd-edition

The "Python Machine Learning (2nd edition)" book code repository and info resource

rhythm_detection_benchmark

rpackages

R package development - the Leek group way!

sam_tutorial

SAM tutorial Fall 2023 (forked)

sds375

SDS 375 Data Visualization in R

shiny_apps

tidytuesday

#TidyTuesday submissions

timecourse_geneexpression_data

Datasets compiled and published by Laloum and Robinson-Rechavi

timecoursernaseq

Analyses And Visualisation Of Timecourse RNASeq Data

will_et_al_2020

This repository contains annotated code for the function that performs functional enrichment analysis of GO/PFAM terms using a hypergeometric test, used in Will et al. 2020