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biointec's Projects

adaptivescoping icon adaptivescoping

Adaptive scoping: balancing short- and long-term genetic gain in plant breeding

blamm icon blamm

BLAS Accelerated Motif Matching - Fast software for PWM motif matching

browniealigner icon browniealigner

Alignment algorithm for short Illumina reads to a de Bruijn graph

columba icon columba

Fast Approximate Pattern Matching using Search Schemes

detox icon detox

Inference of arc and node multiplicities in de Bruijn graphs

halvade icon halvade

Parallel read alignment and variant calling using MapReduce

jabba icon jabba

Read error correction tool for PacBio data

nexus icon nexus

Pan-genome compacted de Bruijn graphs with support for approximate pattern matching using search schemes

scoping icon scoping

Preserving genetic variation in a breeding population for long-term benefits

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