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Bioinformatics Resources's Projects

bioinfcourse icon bioinfcourse

Lectures and exercises for Bionformatics and Genomics course given at the FBA autumn 2015. Mostly in perl, and latex

codon_table_parser icon codon_table_parser

Parses the NCBI genetic code table, generating hash maps of each species' name, start codons, stop codons and codon table. The output of CodonTableParser can be customized easily and used to update the respective constants of BioRuby's CodonTable class whenever the original data has changed.

seq-align icon seq-align

Fast, portable C implementations of Needleman-Wunsch and Smith-Waterman sequence alignment

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