Comments (3)
ansell
commented on August 20, 2024
Are you using the updated entrez_gene.php code from pull request #103 that has not yet been merged in? If you can test the code by pulling the updates from jctoledo:master and comment at #103 it would be great.
from bio2rdf-scripts.
dklassen
commented on August 20, 2024
Yup, i pulled jctoledo:master and tried again. Same error as the initial error. Looking at the code I don't see a "download" function or use of wget/curl .
from bio2rdf-scripts.
alisoncallahan
commented on August 20, 2024
OK, I've updated the Entrez Gene code so that it downloads the files on
request.
Alison
On Thu, Aug 16, 2012 at 5:03 AM, Dana Klassen [email protected]:
Yup, i pulled jctoledo:master and tried again. Same error as the initial
error. Looking at the code I don't see a "download" function or use of
wget/curl .—
Reply to this email directly or view it on GitHubhttps://github.com//issues/107#issuecomment-7780123.
from bio2rdf-scripts.
Related Issues (20)
- PharmGKB drug parse needs update
- PharmGKB disease parse needs update
- types in PharmGKB relationships
- Variation in KEGG URIs
- PharmGKB Variant data parsing needs to be revised
- PharmGKB pathway download not functional HOT 2
- Erroneous label for drugbank type
- Hash URIs for Drugbank HOT 2
- Error in KEGG link generation HOT 2
- spaces in URIs and unescaped back slashes in the generated output for DRUGBANK HOT 4
- drugbank: protein group problem
- backslash characters in clinicaltrials HOT 4
- XML parse error for clinicaltrials HOT 1
- Malformed Links HOT 1
- WikiPathways license in datasets documentation is outdated HOT 1
- Drugbank drug-target interactions HOT 4
- How can I parse the Drugbank.nq.gz? HOT 2
- dataset hyperlink not functional??? HOT 1
- Link to v3 release notes broken HOT 1
- Inquiry about using bio2rdf to parse drugbank HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from bio2rdf-scripts.