bepoli Goto Github PK
Name: Benedetto Polimeni
Type: User
Company: Genome Biology Unit @ INGM, Milan
Bio: Bioinformatician
Twitter: be_poli
Location: Italy
Name: Benedetto Polimeni
Type: User
Company: Genome Biology Unit @ INGM, Milan
Bio: Bioinformatician
Twitter: be_poli
Location: Italy
Conda recipes for the bioconda channel.
10x Genomics Single Cell 3' Gene Expression and VDJ Assembly
Chromatin immunoprecipitation (ChIP-seq) analysis using BWA and MACS2 with QC steps.
The complete sequence of a human genome
Course Files for Complete Python 3 Bootcamp Course on Udemy
Turn an existing conda environment into a Docker or Singularity container
Package for analyzing RNA crosslinking and proximity ligation data (PARIS and beyond)
Assignment of "Getting and Cleaning Data" course from Coursera JHU Data Science specialization
The Leek group guide to data sharing
Tools to process and analyze deep sequencing data.
Dotfiles managed with a git bare repo
Automatically exported from code.google.com/p/ea-utils
Plotting Assignment 1 for Exploratory Data Analysis
🧬 gget enables efficient querying of genomic databases and software, such as Ensembl and AlphaFold, directly into a Python or terminal programming environment.
A tool to quantify transposable elements expression in scRNA-seq
Jupyter R kernel from a container, designed for working on a jupyterhub server/HPC
An Italian keyboard layout for Windows, customized with shortcuts from Linux systems
A Jupyter Lab extension for keyboard text shortcuts
Rapid builds of small Conda-based containers using micromamba.
Miscellaneous bioinformatics utilities
A modern curriculum vitae class for LaTeX
Repository to host tool-specific module files for the Nextflow DSL2 community!
Multiprocessing functionality with pysam
Nanopore demultiplexing, QC and alignment pipeline
Nextflow plugin for VIM
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.