benjaminsipes Goto Github PK

benjaminsipes.github.io

complex_laplacian

Eigenmodes of the SC complex Laplacian matrix

dcbc

git-papers

graphlet_toolbox

use network structure of texts to predict authorship

journalclub

Journal Club

micapipe

micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below

networkqit

Optimization of spectral entropies on complex networks

neuromaps

A toolbox for comparing brain maps

nipype

Workflows and interfaces for neuroimaging packages

pipetography

Nipype and tractography!

pipetography-hpccode

A repo for the basic scripts to run pipetography on an HCP cluster (SGE or SLURM).

rbenv

Manage your app's Ruby environment

rest-system-id

MATLAB code for identifying various linear and nonlinear dynamical systems models from resting state neural time series, and more!

sb_toolbox

sbci_pipeline

Core pipeline scripts for SBCI

sbci_toolkit

MATLAB scripts for visualisation and analysis of SBCI data

sbi-sgm-clean

spectrome

Spectral graph model base code and examples

spectrome-revisited

spectrome-stability-1

tvb-root

Main TVB codebase

tvdn

wormdatamodel

Data model for whole brain recordings

wormneuroatlas

Neural signal propagation atlas (Randi et al.), genome (WormBase), single-cell transcriptome (Taylor et al.), neuropeptide/GPCR deorphanization (Beets et al.), monoaminergic connectome (Bentley et al.), and chemical-synapse sign predictions (Fenyves et al.) all in one place. Read the docs: https://francescorandi.github.io/wormneuroatlas/

xcp_d

post processing of fmriprep , nibabies, hcp and dcan