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oriolarques avatar oriolarques commented on August 24, 2024

I managed to install it by downloading the source package and install it with the terminal using $R CMD INSTALL oligoClasses_1.50.0.tar. However, the error keeps appearing.

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jmacdon avatar jmacdon commented on August 24, 2024

The RangedData class has been made defunct in IRanges. All the functions in oligoClasses that relied on that class were already defunct and I just made them deprecated in the devel version on Bioconductor. I used to have commit privileges to Benilton's github, but no longer seem to, so cannot (yet) push those changes here.

But in about 24 hours the devel version should get rebuilt on Bioconductor, and you will be able to get it using BiocManager::install.

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oriolarques avatar oriolarques commented on August 24, 2024

Thank you very much for the response. I will try it.

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