I lead the Dynamics and Neural Systems Group in the School of Physics at the University of Sydney.
Please check out our team's open code in the organizational GitHub page for the Dynamics and Neural Systems Group.
Name: Ben Fulcher
Type: User
Company: @DynamicsAndNeuralSystems
Bio: I use methods from physics and statistics to understand the structure and dynamics of complex systems like the brain
Twitter: bendfulcher
Location: Sydney, Australia
Blog: www.benfulcher.com
I lead the Dynamics and Neural Systems Group in the School of Physics at the University of Sydney.
Please check out our team's open code in the organizational GitHub page for the Dynamics and Neural Systems Group.
Workflow for retrieving spatial gene-expression data from the Allen Institute's Mouse Brain Atlas
Preprint classes for biological journals
Testing candidate new features for uniqueness (to be included in hctsa)
R package for calculation of 22 CAnonical Time-series CHaracteristics
CNS 2020 tutorial for hctsa
The API for the CompEngine project
Front end source code for the CompEngine project
Running hctsa on a cluster (pbs or slurm)
Low-dimensional projection of diverse empirical time-series data
Jekyll Theme
Introduction to Fourier Analysis in Matlab
Analysis of statistical biases in Gene Set Enrichment Analysis applied to transcriptomic atlas data
Toolbox for performing gene set enrichment analysis in Matlab (including ensemble enrichment)
Highly comparative time-series analysis
Cluster operations from hctsa to create a useful subset
Running hctsa analysis on movement speed data of five strains of worm
Initial attempt to incorporate some time-series analysis features from hctsa into python land
Code for running python analyses of hctsa data
gitbook documentation for hctsa
hctsa tutorial using the five-class Bonn EEG dataset
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