Comments (2)
Currently fails https://github.com/Becksteinlab/propkatraj/actions/runs/8919983113/job/24497145181
Run cd docs && sphinx-build -T -E --keep-going -b html -D language=en sphinx html
Running Sphinx v7.3.7
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 563, in from_name
return next(cls.discover(name=name))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
StopIteration
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.11/site-packages/sphinx/config.py", line 509, in eval_config_file
exec(code, namespace) # NoQA: S102
^^^^^^^^^^^^^^^^^^^^^
File "/home/runner/work/propkatraj/propkatraj/docs/sphinx/conf.py", line 11, in <module>
import propkatraj
File "/home/runner/work/propkatraj/propkatraj/propkatraj/__init__.py", line 4, in <module>
__version__ = version('propkatraj')
^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 1009, in version
return distribution(distribution_name).version
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 982, in distribution
return Distribution.from_name(distribution_name)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 565, in from_name
raise PackageNotFoundError(name)
importlib.metadata.PackageNotFoundError: No package metadata was found for propkatraj
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.11/site-packages/sphinx/cmd/build.py", line 332, in build_main
app = Sphinx(args.sourcedir, args.confdir, args.outputdir,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/site-packages/sphinx/application.py", line 211, in __init__
self.config = Config.read(self.confdir, confoverrides or {}, self.tags)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/site-packages/sphinx/config.py", line 309, in read
namespace = eval_config_file(filename, tags)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/site-packages/sphinx/config.py", line 522, in eval_config_file
raise ConfigError(msg % traceback.format_exc()) from exc
sphinx.errors.ConfigError: There is a programmable error in your configuration file:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 563, in from_name
return next(cls.discover(name=name))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
StopIteration
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.11/site-packages/sphinx/config.py", line 509, in eval_config_file
exec(code, namespace) # NoQA: S102
^^^^^^^^^^^^^^^^^^^^^
File "/home/runner/work/propkatraj/propkatraj/docs/sphinx/conf.py", line 11, in <module>
import propkatraj
File "/home/runner/work/propkatraj/propkatraj/propkatraj/__init__.py", line 4, in <module>
__version__ = version('propkatraj')
^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 1009, in version
return distribution(distribution_name).version
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 982, in distribution
return Distribution.from_name(distribution_name)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 565, in from_name
raise PackageNotFoundError(name)
importlib.metadata.PackageNotFoundError: No package metadata was found for propkatraj
Configuration error:
There is a programmable error in your configuration file:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 563, in from_name
return next(cls.discover(name=name))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
StopIteration
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/share/miniconda3/envs/test/lib/python3.11/site-packages/sphinx/config.py", line 509, in eval_config_file
exec(code, namespace) # NoQA: S102
^^^^^^^^^^^^^^^^^^^^^
File "/home/runner/work/propkatraj/propkatraj/docs/sphinx/conf.py", line 11, in <module>
import propkatraj
File "/home/runner/work/propkatraj/propkatraj/propkatraj/__init__.py", line 4, in <module>
__version__ = version('propkatraj')
^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 1009, in version
return distribution(distribution_name).version
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 982, in distribution
return Distribution.from_name(distribution_name)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/share/miniconda3/envs/test/lib/python3.11/importlib/metadata/__init__.py", line 565, in from_name
raise PackageNotFoundError(name)
importlib.metadata.PackageNotFoundError: No package metadata was found for propkatraj
Error: Process completed with exit code 2.
from propkatraj.
Looks like we probably have to install propkatraj before we build the docs.
from propkatraj.
Related Issues (20)
- Add powered by MDAnalysis badge HOT 1
- Reformat for MDAnalysis 2.0 HOT 1
- 2.0.0 release HOT 8
- Upgrade documentation HOT 1
- Fix coveragerc to not try to cover things that we don't need to check HOT 1
- add new pypi maintainers HOT 2
- Add propka 3.4 support HOT 2
- conda-forge package HOT 1
- only use one "main" branch HOT 2
- add doc badge to README
- Fix license HOT 3
- use CODECOV_TOKEN
- api doc formatting of argument lists messed up HOT 4
- remove CRON CI codecov
- Make python support 3.9+ HOT 3
- sphinx docs fail to build with `python setup.py build_sphinx` HOT 1
- AttributeError: module 'propkatraj' has no attribute 'get_propka' HOT 2
- Python 3.9 CI failing due to MDAnalysis develop supporting different py than stable
- Tests fail for MDAKit registry check HOT 2
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from propkatraj.