Name: Bayraktar Group
Type: Organization
Bio: We seek to explore the vast cellular diversity in the human brain using large-scale spatial transcriptomics, imaging and functional screens.
Twitter: bayraktar_lab
Location: Cellular Genetics, Wellcome Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK
Blog: https://www.sanger.ac.uk/group/bayraktar-group/
Bayraktar Group's Projects
Inference of RNA velocity modules for prediction of cell fates and integration with spatial and regulatory models.
Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)
CountCorrect: Background removal for Nanostring WTA data
Feature based registration for fluorescence microscopy images
Image visualization in a browser with batteries included (mirroring from internal gitlab)
Optical flow based registration for fluorescence microscopy images
A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas