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awesome-machine-learning-for-healthcare

codoc

dvces

ehrsql

EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records

ehrsql-2024

ehrxqa

EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images

ehrxqa-2024-ml4h

explaining-in-style-reproducibility-study

Re-implementation of the StylEx paper, training a GAN to explain a classifier in StyleSpace, paper by Lang et al. (2021).

kosaim2022-chest-x-ray-classification

[KoSAIM 2022 Summer School] Hands-On-CNN: Chest X-ray Classification

lit-gpt

Hackable implementation of state-of-the-art open-source LLMs based on nanoGPT. Supports flash attention, 4-bit and 8-bit quantization, LoRA and LLaMA-Adapter fine-tuning, pre-training. Apache 2.0-licensed.

lm-evaluation-harness

A framework for few-shot evaluation of autoregressive language models.

med-flamingo

medical-chatbot-using-bert-and-gpt2

medvill-vqa

Implementation code for MedViLL-VQA

mimic-cxr-vqa

A new collection of medical VQA dataset based on MIMIC-CXR. Part of the work 'EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images, NeurIPS 2023 D&B'.

mimic3-benchmarks

Python suite to construct benchmark machine learning datasets from the MIMIC-III clinical database.

minima-test.github.io

Minima is a one-size-fits-all Jekyll theme for writers.

mmbert

A unofficial PyTorch implementation of 'MMBERT: Multimodal BERT Pretraining for Improved Medical VQA, Khare and Yash et al., ISBI 2021'

neural_programmer_iclr2016_implementation

This is an attempt to implement the neural programmer designed by Neelakantan et al. and introduced in the paper "Neural Programmer: Inducing Latent Programs with Gradient Descent".

nmn-drop

Neural Module Network for Reasoning over Text, ICLR 2020

note-viz-streamlit

pubmedclip

Fine-tuning CLIP using ROCO dataset which contains image-caption pairs from PubMed articles.

study_of_vl

KAIST medical VL research group

style-chexplain

GAN-based method to create counterfactual explanations for chest X-rays

text-generation-webui

A Gradio web UI for Large Language Models. Supports transformers, GPTQ, llama.cpp (GGUF), Llama models.

til

Today I Learned

toxic_molecule

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