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nleguillarme avatar nleguillarme commented on July 3, 2024

Hi @JohnGiorgi.

I am currently working on a review of taxon mentions recognition tools for ecological information extraction, and I have just discovered Saber which I'd like too include as an example of state-of-the-art deep learning-based approach.

Unfortunately, it seems that the LIVB pre-trained model does not exist at the moment. Any idea when it might be available? Or should I consider training my own model?

Thank you for your help.

from saber.

JohnGiorgi avatar JohnGiorgi commented on July 3, 2024

Hi @nleguillarme,

Thanks for your interest. Unfortunately, we are no longer maintaining the project. I would suggest checking out AllenNLP, Transformers or ScispaCy for state-of-the-art NER. ScispaCy has pretrained models that will detect organism names (see the model trained on BIONLP13CG specifically).

from saber.

nleguillarme avatar nleguillarme commented on July 3, 2024

Too bad the project is dead, it seemed like a great tool.
Thanks for the pointers.

from saber.

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