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audy

audy

audy.github.io

my site / blog

awesome-genome-visualization

A list of interesting genome browser or genome-browser-like implementations

awesome-public-datasets

An awesome list of (large-scale) public datasets on the Internet. (On-going collection)

awesome-slugify

Python flexible slugify function

banana

A tool for handling multiplexed 454 and Illumina generated sequence data

barcode-generator

Generate nucleotide sequences for multiplexed sequencing aka "barcoding" given some constraints.

bart-analysis

:station: Analyzing BART data

berkeley-bowl-soups

Scraping and analyzing the daily soup offerings at Berkeley Bowl

bfc

Move along. Nothing to see here.

bio-dat

Examples/experiments of using dat with bioinformatics (sequence) data.

bio-xl

Tools for dealing with large (> memory) collections of nucleotide sequences

bioinformatics

annotated list of bioinformatics tools I used

bioinformatics-hacks

Scripts for miscelleneous bioinformatics tasks

biom-format

The Biological Observation Matrix (BIOM) Format Project

bitbars

my bitbar plugins

blamer

Blamer adds userstamps to ActiveRecord models

bleep-bloop

Procedurally generated, therapeutic bleeps and occasionally bloops

bots

:robot: bleep bloop

box

c

I took this class and got a B

capp-stories

Source of http://twitter.com/cappstories

catsay

:cat: :computer: like cowsay but cats

cd-hit-that

cheatsheets

checkm

Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes

clump

Another class project

containers

Bioinformatics containers

corpora

A collection of small corpuses of interesting data for the creation of bots and similar stuff.

craigslist

Unofficial mirror/fork of the now defunct Craigslist RubyGem.