Error running example (with quantification) about appian HOT 3 CLOSED

Thanks for your feedback!

tl;dr: the bug is fixed on tffunck/appian:latest-dev. give it a go and if it works i'll close the issue report.

long story: tracer kinetic analysis requires specifying a start time at which to begin the linear regression it uses to calculate radiotracer binding parameters. a default start time used to be specified in "args_parse.py", but was removed at some point. now, the start time is now set in the python modules in Tracer_Kinetic/methods/ that define the quantification modules.

Cheers,

Thomas

from appian.

Thanks--it does work now. Is there any way to have it output the TACs for all atlas ROIs?

from appian.

Nice, glad it worked for you.

Yes, this is actually done by default, so long as you don't use the --no-results-report flag. Would you mind sending an email with your question to the APPIAN-users email-list (https://groups.google.com/forum/#!forum/appian-users). Your question might be of interest to others and will be more accessible this way.

from appian.