Comments (2)
Hi marie I dont think this is a problem of too big files. We have used angsd on much larger files. Could you check that the segfault is reproducible?
from angsd.
Im closing this issue, feel free to reopen if needed
from angsd.
Related Issues (20)
- Segmentation Fault HOT 1
- problems with estAvgError.R HOT 1
- Length of fastafile vs length of chr in BAM header HOT 1
- Contamination test, Error in dimnames(x)
- Population level theta with saf2theta
- [loadChr] Error loading fasta info from chr
- Missing windows in thetaStat
- Number of numbers output by realSFS HOT 1
- merging binary all 10 log genotype likelihood
- angsd: realloc() error
- 0 sites retained after filtering when using -sites HOT 1
- estAvgError.R script error
- -argument is unknown will exit HOT 1
- Killed HOT 1
- Problems with unsorted saf file chromoname HOT 1
- SAF file out of sync
- bcf file doesn't open
- https://www.popgen.dk/angsd/ is down
- bcf output file with "." at QUAL column HOT 1
- Issue with angsd -doSaf 1 Not Generating Proper saf.idx File
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from angsd.