Name: Chantriolnt Andreas Kapourani
Type: User
Company: University of Edinburgh
Bio: Post-doctoral fellow @EdinburghUni, @VallejosGroup and Neil Henderson. Machine learning and statistical modelling of single-cell genomics.
Twitter: AndreasKapou
Location: Edinburgh, UK
Blog: https://andreaskapou.github.io/
Chantriolnt Andreas Kapourani's Projects
Experiments for ames-mouse data from Beatson
Website
Bayesian Consensus Clustering for High Throughput Sequencing data
Modelling DNA methylation profiles
Extracting higher order methylation features - Development version
Convenience R functions
Experiments for ECCB 2016
Gaussian Processes (GPR and GPC)
Bayesian Clustering and Imputation of Single Cell Methylomes
Archive version of Melissa - Bayesian Clustering and Imputation of Single Cell Methylomes
Mixture Models - EM and Gibbs sampling
Model Methylation Profiles / Correlation with Gene Expression (testing purposes)
MRes Thesis Report - Dissertation
Package to process data generate from HTS technology (testing purposes)
Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
Repo containing analysis for scMET manuscript
spatialDGM implementation using scvi-tools
Packaging common Seurat analysis tasks for reproducible research
Repo containing data and tutorial for the SeuratPipe package
A Toolbox for Spatial Gene Expression Analysis
Spatial deep generative models