Comments (2)
stamatak
commented on June 7, 2024
Could potentially boost RAxML-NG performance, maybe discretize into rate cats by initially using a free rates model with 4 or 8 discrete rates?
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Zichen-Zhou
commented on June 7, 2024
Hi RAxML-NG team, I'm trying to use RAxML-NG to analysis a huge dataset which has been collapsed several times when using RAxML. But the GTR+CAT is the preferred model. May I know if I can run with GTR+CAT on current RAxML-NG version? Thanks for your attention.
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Related Issues (20)
- Error: assertion failed HOT 9
- all branch lengths always `0.000001` with CATG file HOT 4
- how to set the random start tree?
- What libpll code is really needed HOT 3
- BalancerStat Assertion failed? HOT 1
- very very large dataset recomendations HOT 2
- Bus Error on Apple M1 Ultra Using RAxML-NG v. 1.2.0 HOT 3
- Broken link for Mac M1 binary HOT 1
- libc++abi: terminating with uncaught exception of type std::runtime_error: ERROR in SPR round (LIBPLL-3584): Constraint check failed after SPR round! HOT 8
- can raxml-ng handle 6 million genomes of SARS-CoV-2? HOT 4
- masked missing positions HOT 1
- which software and parameters should I use to construct a good ml tree? HOT 1
- tbe values when using a constraint tree HOT 1
- What is the different between G4 and G4m, thanks. HOT 1
- Binary data input format HOT 6
- why the number is from #2 to #1? HOT 2
- Too many samples on a long branch in a rooted tree containing three outgroup tips HOT 1
- Add raxml-ng in apt
- Making tree from large dataset HOT 8
- Substitution rates HOT 3
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