amfrancette Goto Github PK
Name: Alex Francette
Type: User
Bio: A PhD. Candidate at the University of Pittsburgh
Name: Alex Francette
Type: User
Bio: A PhD. Candidate at the University of Pittsburgh
Tools for querying and analysis of genomic data
The intronic enrichment score calculates the average coverage of RNA-seq reads over introns relative to neighboring exons in Saccharomyces cerevisiae. This score can be used to quantify enrichment of nascent transcripts from techniques such as 4tU-seq and TT-seq or to quantify defects in transcript splicing.
Code and associated annotation file to count the ratio of spliced an unspliced reads for all intron-containing genes.
Source code for processing RNA-seq, ChIP-seq, and MNase-Seq data for Hildreth et al. "Mutations that alter the nucleosome DNA entry-exit site impair transcription termination in vivo"
This repository holds code for RNA-seq analysis handling stranded and un-stranded RNA-seq data.
Code related to calculating a corrective scaling factor to detect and correct for off-expecation ratios of sample to spike in for NGS experiments.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.