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btoomey avatar btoomey commented on June 12, 2024

I think this is a good idea, but I'm not really sure how to go about it. The documentation for the generateCVRuns function doesn't list any seed arguments:

image

from crossvalidation.

btoomey avatar btoomey commented on June 12, 2024

Or does calling set.seed() at the beginning of the script set the seed for the duration of the script?

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ramnathv avatar ramnathv commented on June 12, 2024

Yes. You can simply run set.seed before the random portion of your code, which I believe is the call to generateCVRuns. We can choose a default seed so that the user can get run-over-run consistency. We can make the default random if required using Math.round(Math.random()*10e4) in javascript.

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btoomey avatar btoomey commented on June 12, 2024

As this example shows, set.seed() doesn't make generateCVRuns deterministic.

myLetters <- sample(c("A", "B", "C"), size = 100, replace = TRUE)
set.seed(1)
library(ROCR)
firstruns <- generateCVRuns(labels = myLetters, ntimes = 2, nfold = 10)
secondruns <- generateCVRuns(labels = myLetters, ntimes = 2, nfold = 10)

Can we do anything about this? If not, should I implement a "fold creating" function that can use the user-chosen seed myself?

from crossvalidation.

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