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Antonín Pavelka's Projects

angular-distance icon angular-distance

Measures similarity between two pairs of objects using their orientation toward each other.

biojava icon biojava

:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java framework for processing biological data.

coordinates-compression icon coordinates-compression

This repository contains the compression methods described in the paper "Towards an efficient compression of 3D coordinates of macromolecular structures".

locator icon locator

Fast full text search in text files.

mmtf-java icon mmtf-java

The java implementation of the MMTF API, decoder and encoder.

mmtf-spark-1 icon mmtf-spark-1

Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.

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