Related Issues (20)
- Remove output section from default YAML file
- Re-add the `--self` option
- Unable to load alignment module HOT 5
- Running alitv.pl twice with overwrite results in an error HOT 1
- Add `--no-self` option
- Support lastz Sequence Specifiers HOT 3
- Add lastz binary
- Different rounding of identity in links and filters HOT 3
- Add option to just create yml
- Default lastz parameter --ambiguous=iupac HOT 5
- Add default lastz option --allocate:traceback=800M HOT 1
- Add CITATION.cff
- Unable to load alignment module 'AliTV::Alignment::lastz' HOT 8
- reduce the number of alignment HOT 3
- can't download AliTV onto mac HOT 5
- unable to identify sequence in sequence set by name HOT 12
- Buggy BioPerl warning too verbose HOT 2
- Unable to find lastz HOT 2
- Demo annotation occurred in my own json file. HOT 8
- MSG: Failed validation of sequence '[unidentified sequence]'. Invalid characters were: _900108945113131010000441 HOT 2
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