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2017-10-31-norwich

aafun

ASReml-R Added functions

biojs-vis-expression-bar

cicd-pipeline-train-schedule-git

Train Schedule sample app for Git exercises

copo

Collaborative Open Plant Omics

cyverseuk-util

A collection of scripts for the cyverse UK clusters

demo_image

tiny blast image for workshop demonstration

docker

earlhaminstitute_scripts

game_of_life

gitpitch_test

imageinfo

json.sh

a pipeable JSON parser written in Bash

kallisto_docker

docker image for kallisto

lab_journal

metadata

For version control of DToL metadata including (but not limited to) the Sample manifest documents

model_scripts

model_version2

second model with classes

papaya

polymarker_docker

dockerfile for automate build

python-novice-inflammation

Software Carpentry introduction to Python for novices using inflammation data.

redis

Redis is an in-memory database that persists on disk. The data model is key-value, but many different kind of values are supported: Strings, Lists, Sets, Sorted Sets, Hashes, Streams, HyperLogLogs, Bitmaps.

renseq

Renseq Pacbio pipeline

scripts

shields

Shields badge specification, website and default API server

tadbit

TADbit is a complete Python library to deal with all steps to analyze, model and explore 3C-based data. With TADbit the user can map FASTQ files to obtain raw interaction binned matrices (Hi-C like matrices), normalize and correct interaction matrices, identify and compare the so-called Topologically Associating Domains (TADs), build 3D models from the interaction matrices, and finally, extract structural properties from the models. TADbit is complemented by TADkit for visualizing 3D models

tsl-training.github.io