Name: Alex Reynolds
Type: User
Company: Altius Institute for Biomedical Sciences
Bio: Pug caregiver, curler, cyclist, gardener, beginning French scholar
Location: Seattle, WA USA
Blog: bitsumma.com
Alex Reynolds's Projects
Animated 'like' button and notification with React Hooks, CSS, and Javascript.
Web service for adding and querying a genomic annotation set for an entry identifier
Expressjs + Redis-backed annotations web service with autocomplete
Automata is a small library for generating one-dimensional, two-color cellular automata
Parse BAM and BAM index files in javascript for node and the browser
Convert generic BED12 to BAM
Conda recipes for the bioconda channel.
Online companion for the Biostar Handbook.
React bubble plot test
Generate and explore upper triangular and square matrices of 1-byte values
Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.
Starting with a seed color and desired number of colors, returns an array of colors
Convert common binary and text genomic formats to BED
A tool to make cubes!
Filter lower-scoring, neighboring genomic intervals within a specified distance
Continuous area cartograms with d3 and TopoJSON
Sequence Logo generation in d3.js
clustering data via DBSCAN
An API to simulate a deck of cards
Density Based Clustering in JavaScript
Convert Index DHS BED12 representation to BAM
Build a list of high-scoring, non-overlapping intervals using sampling or scheduling methods
eFORGE TF client
Web client and services for eFORGE
Methods for summarizing and visualizing multi-biosample functional genomic annotations
Compression library for FastQ files, code from http://mattmahoney.net/dc/fastqz/
Filter genomic regions by score and proximity
Convert FIRE-linker-nucleosome data in BED11 to SAM