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AlexeyPechnikov avatar AlexeyPechnikov commented on June 16, 2024

Hi @spacefan Please update PyGMTSAR to the recent version (that's important because the newest version of the required 3rd party library NetCDF processing library h5netcdf is broken and we need to use previous one for now). Also, check if some changes added to the Google Colab notebook S1A_Stack_CPGF_T173.ipynb Let me know if you still have the issue.

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spacefan avatar spacefan commented on June 16, 2024

Problem still exits with the same error under pygmtsar 2022.11.26. It's weird that the example datasets S1A_Stack_CPGF_T173.tar.gz works fine when using .nc DEM file, h5netcdf 1.0.2 can not handle .grd DEM file correctly.

Is there possible the problem of pandas, maybe i can check the source a few days latter...

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AlexeyPechnikov avatar AlexeyPechnikov commented on June 16, 2024

It looks as problem with "importlib-metadata" library with version >4.12.0 What version do you have? In case you use the correct version (importlib-metadata<=4.12.0) please share the notebook and the used scenes list to check.

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spacefan avatar spacefan commented on June 16, 2024

The version of importlib-metadata library = 4.12.0, all my conda env list as follows:

$ conda list
# packages in environment at /home/intplanet/miniconda3:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                        main  
_openmp_mutex             4.5                       1_gnu  
affine                    2.3.1              pyhd8ed1ab_0    conda-forge
anyio                     3.6.2              pyhd8ed1ab_0    conda-forge
appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
argon2-cffi               21.3.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0           py37h540881e_2    conda-forge
asciitree                 0.3.3                      py_2    conda-forge
atk-1.0                   2.36.0               h3371d22_4    conda-forge
attrs                     22.1.0             pyh71513ae_1    conda-forge
babel                     2.10.3             pyhd8ed1ab_0    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                        py_2    conda-forge
backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
beautifulsoup4            4.11.1             pyha770c72_0    conda-forge
blas                      2.14                   openblas    conda-forge
bleach                    5.0.1              pyhd8ed1ab_0    conda-forge
blosc                     1.21.0               h9c3ff4c_0    conda-forge
bokeh                     2.4.3              pyhd8ed1ab_3    conda-forge
boost-cpp                 1.74.0               hc6e9bd1_3    conda-forge
bottleneck                1.3.2            py37h902c9e0_3    conda-forge
branca                    0.5.0              pyhd8ed1ab_0    conda-forge
brotli                    1.0.9                h7f98852_5    conda-forge
brotli-bin                1.0.9                h7f98852_5    conda-forge
brotlipy                  0.7.0           py37h27cfd23_1003  
brunsli                   0.1                  h9c3ff4c_0    conda-forge
bzip2                     1.0.8                h7f98852_4    conda-forge
c-ares                    1.17.1               h7f98852_1    conda-forge
ca-certificates           2022.10.11           h06a4308_0  
cached-property           1.5.2                hd8ed1ab_1    conda-forge
cached_property           1.5.2              pyha770c72_1    conda-forge
cairo                     1.16.0            h6cf1ce9_1008    conda-forge
cartopy                   0.19.0.post1     py37h0c48da3_0    conda-forge
certifi                   2022.9.24        py37h06a4308_0  
cffi                      1.15.0           py37hd667e15_1  
cfitsio                   3.470                h2e3daa1_7    conda-forge
cftime                    1.5.0            py37h6f94858_0    conda-forge
charls                    2.2.0                h9c3ff4c_0    conda-forge
charset-normalizer        2.0.4              pyhd3eb1b0_0  
chrpath                   0.16              h7f98852_1002    conda-forge
click                     7.1.2                    pypi_0    pypi
click-plugins             1.1.1                      py_0    conda-forge
cligj                     0.7.2              pyhd8ed1ab_1    conda-forge
cloudpickle               2.2.0              pyhd8ed1ab_0    conda-forge
colorama                  0.4.4              pyhd3eb1b0_0  
colorcet                  3.0.1              pyhd8ed1ab_0    conda-forge
conda                     22.9.0           py37h06a4308_0  
conda-content-trust       0.1.1              pyhd3eb1b0_0  
conda-package-handling    1.8.1            py37h7f8727e_0  
cryptography              36.0.0           py37h9ce1e76_0  
curl                      7.78.0               hea6ffbf_0    conda-forge
cycler                    0.11.0             pyhd8ed1ab_0    conda-forge
cytoolz                   0.11.0           py37h5e8e339_3    conda-forge
dask                      2022.2.0           pyhd8ed1ab_0    conda-forge
dask-core                 2022.2.0           pyhd8ed1ab_0    conda-forge
dask-image                2022.9.0                 pypi_0    pypi
datashader                0.14.2             pyh6c4a22f_0    conda-forge
datashape                 0.5.4                      py_1    conda-forge
dbus                      1.13.6               h48d8840_2    conda-forge
dcw-gmt                   2.1.1                ha770c72_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
distributed               2022.2.0         py37h89c1867_0    conda-forge
elevation                 1.1.3              pyhd8ed1ab_0    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
expat                     2.4.1                h9c3ff4c_0    conda-forge
fasteners                 0.17.3             pyhd8ed1ab_0    conda-forge
ffmpeg                    4.3.2                hca11adc_0    conda-forge
fftw                      3.3.9                h27cfd23_1  
fiona                     1.8.18           py37h17d6ad9_1    conda-forge
flit-core                 3.7.1              pyhd8ed1ab_0    conda-forge
folium                    0.13.0             pyhd8ed1ab_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 hab24e00_0    conda-forge
fontconfig                2.13.1            hba837de_1005    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
freetype                  2.10.4               h0708190_1    conda-forge
freexl                    1.0.6                h7f98852_0    conda-forge
fribidi                   1.0.10               h36c2ea0_0    conda-forge
fsspec                    2022.10.0          pyhd8ed1ab_0    conda-forge
future                    0.18.2           py37h89c1867_5    conda-forge
gdal                      3.2.1            py37hc5bc4e4_7    conda-forge
gdk-pixbuf                2.42.6               h04a7f16_0    conda-forge
geojson                   2.5.0                      py_0    conda-forge
geomet                    0.3.0              pyhd3deb0d_0    conda-forge
geopandas                 0.10.2             pyhd8ed1ab_1    conda-forge
geopandas-base            0.10.2             pyha770c72_1    conda-forge
geos                      3.9.1                h9c3ff4c_2    conda-forge
geotiff                   1.6.0                h2b14fbe_4    conda-forge
geoviews                  1.9.5              pyhd8ed1ab_0    conda-forge
geoviews-core             1.9.5              pyha770c72_0    conda-forge
gettext                   0.19.8.1          h0b5b191_1005    conda-forge
ghostscript               9.54.0               h9c3ff4c_1    conda-forge
giflib                    5.2.1                h36c2ea0_2    conda-forge
glib                      2.68.3               h9c3ff4c_0    conda-forge
glib-tools                2.68.3               h9c3ff4c_0    conda-forge
gmp                       6.2.1                h58526e2_0    conda-forge
gmt                       6.1.1                hbd5eb69_5    conda-forge
gnuplot                   5.4.1                hec6539f_2    conda-forge
gnutls                    3.6.13               h85f3911_1    conda-forge
graphicsmagick            1.3.35               h2852e03_2    conda-forge
graphite2                 1.3.13            h58526e2_1001    conda-forge
gshhg-gmt                 2.3.7             ha770c72_1003    conda-forge
gst-plugins-base          1.18.4               h29181c9_0    conda-forge
gstreamer                 1.18.4               h76c114f_2    conda-forge
gtk2                      2.24.33              h539f30e_1    conda-forge
h5netcdf                  1.0.2                    pypi_0    pypi
h5py                      3.3.0           nompi_py37ha3df211_100    conda-forge
harfbuzz                  2.8.2                h83ec7ef_0    conda-forge
hdf4                      4.2.15               h10796ff_3    conda-forge
hdf5                      1.10.6          nompi_h7c3c948_1111    conda-forge
heapdict                  1.0.1                      py_0    conda-forge
holoviews                 1.15.2             pyhd8ed1ab_0    conda-forge
html2text                 2020.1.16                  py_0    conda-forge
hvplot                    0.8.1              pyhd8ed1ab_0    conda-forge
icu                       68.1                 h58526e2_0    conda-forge
idna                      3.3                pyhd3eb1b0_0  
imagecodecs               2021.3.31        py37haf4b6ec_0    conda-forge
imageio                   2.13.1             pyhd8ed1ab_0    conda-forge
importlib-metadata        4.12.0                   pypi_0    pypi
importlib_resources       5.10.0             pyhd8ed1ab_0    conda-forge
ipykernel                 5.5.5            py37h085eea5_0    conda-forge
ipython                   7.33.0           py37h89c1867_0    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
ipywidgets                8.0.2              pyhd8ed1ab_1    conda-forge
jedi                      0.18.1             pyhd8ed1ab_2    conda-forge
jinja2                    3.1.2              pyhd8ed1ab_1    conda-forge
joblib                    1.2.0              pyhd8ed1ab_0    conda-forge
jpeg                      9d                   h36c2ea0_0    conda-forge
json-c                    0.15                 h98cffda_0    conda-forge
json5                     0.9.5              pyh9f0ad1d_0    conda-forge
jsonschema                4.17.0             pyhd8ed1ab_0    conda-forge
jupyter                   1.0.0            py37h89c1867_7    conda-forge
jupyter_client            7.0.6              pyhd8ed1ab_0    conda-forge
jupyter_console           6.4.4              pyhd8ed1ab_0    conda-forge
jupyter_core              4.11.1           py37h06a4308_0  
jupyter_server            1.21.0             pyhd8ed1ab_0    conda-forge
jupyterlab                3.5.0              pyhd8ed1ab_0    conda-forge
jupyterlab_pygments       0.2.2              pyhd8ed1ab_0    conda-forge
jupyterlab_server         2.16.2             pyhd8ed1ab_0    conda-forge
jupyterlab_widgets        3.0.3              pyhd8ed1ab_0    conda-forge
jxrlib                    1.1                  h7f98852_2    conda-forge
kealib                    1.4.14               hcc255d8_2    conda-forge
kiwisolver                1.3.1            py37h2527ec5_1    conda-forge
krb5                      1.19.2               hcc1bbae_0    conda-forge
lame                      3.100             h7f98852_1001    conda-forge
lcms2                     2.12                 hddcbb42_0    conda-forge
ld_impl_linux-64          2.35.1               h7274673_9  
lerc                      2.2.1                h9c3ff4c_0    conda-forge
libaec                    1.0.5                h9c3ff4c_0    conda-forge
libblas                   3.8.0               14_openblas    conda-forge
libbrotlicommon           1.0.9                h7f98852_5    conda-forge
libbrotlidec              1.0.9                h7f98852_5    conda-forge
libbrotlienc              1.0.9                h7f98852_5    conda-forge
libcblas                  3.8.0               14_openblas    conda-forge
libclang                  11.1.0          default_ha53f305_1    conda-forge
libcurl                   7.78.0               h2574ce0_0    conda-forge
libdap4                   3.20.6               hd7c4107_2    conda-forge
libdeflate                1.7                  h7f98852_5    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 h516909a_1    conda-forge
libevent                  2.1.10               hcdb4288_3    conda-forge
libffi                    3.3                  he6710b0_2  
libgcc-ng                 11.2.0               h1234567_1  
libgd                     2.3.2                h78a0170_0    conda-forge
libgdal                   3.2.1                h38ff51b_7    conda-forge
libgfortran-ng            7.5.0               h14aa051_20    conda-forge
libgfortran4              7.5.0               h14aa051_20    conda-forge
libglib                   2.68.3               h3e27bee_0    conda-forge
libgomp                   11.2.0               h1234567_1  
libiconv                  1.16                 h516909a_0    conda-forge
libkml                    1.3.0             h238a007_1014    conda-forge
liblapack                 3.8.0               14_openblas    conda-forge
liblapacke                3.8.0               14_openblas    conda-forge
libllvm11                 11.1.0               hf817b99_2    conda-forge
libnetcdf                 4.7.4           nompi_h56d31a8_107    conda-forge
libnghttp2                1.43.0               h812cca2_0    conda-forge
libopenblas               0.3.7                h5ec1e0e_6    conda-forge
libpng                    1.6.37               h21135ba_2    conda-forge
libpq                     13.3                 hd57d9b9_0    conda-forge
librttopo                 1.1.0                h1185371_6    conda-forge
libsodium                 1.0.18               h36c2ea0_1    conda-forge
libspatialindex           1.9.3                h9c3ff4c_4    conda-forge
libspatialite             5.0.1                he52d314_3    conda-forge
libssh2                   1.9.0                ha56f1ee_6    conda-forge
libstdcxx-ng              12.2.0              h46fd767_19    conda-forge
libtiff                   4.2.0                hbd63e13_2    conda-forge
libuuid                   2.32.1            h7f98852_1000    conda-forge
libwebp                   1.2.0                h3452ae3_0    conda-forge
libwebp-base              1.2.0                h7f98852_2    conda-forge
libxcb                    1.13              h7f98852_1003    conda-forge
libxkbcommon              1.0.3                he3ba5ed_0    conda-forge
libxml2                   2.9.12               h72842e0_0    conda-forge
libzopfli                 1.0.3                h9c3ff4c_0    conda-forge
llvmlite                  0.38.0           py37h4ff587b_0  
locket                    1.0.0              pyhd8ed1ab_0    conda-forge
lz4-c                     1.9.3                h9c3ff4c_1    conda-forge
mapclassify               2.4.3              pyhd8ed1ab_0    conda-forge
markdown                  3.4.1              pyhd8ed1ab_0    conda-forge
markupsafe                2.0.1            py37h5e8e339_0    conda-forge
matplotlib                3.4.2            py37h89c1867_0    conda-forge
matplotlib-base           3.4.2            py37hdd32ed1_0    conda-forge
matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
mistune                   2.0.4              pyhd8ed1ab_0    conda-forge
msgpack-python            1.0.2            py37h2527ec5_1    conda-forge
multipledispatch          0.6.0                      py_0    conda-forge
munch                     2.5.0                      py_0    conda-forge
mysql-common              8.0.25               ha770c72_0    conda-forge
mysql-libs                8.0.25               h935591d_0    conda-forge
nbclassic                 0.4.8              pyhd8ed1ab_0    conda-forge
nbclient                  0.7.0              pyhd8ed1ab_0    conda-forge
nbconvert                 7.2.3              pyhd8ed1ab_0    conda-forge
nbconvert-core            7.2.3              pyhd8ed1ab_0    conda-forge
nbconvert-pandoc          7.2.3              pyhd8ed1ab_0    conda-forge
nbformat                  5.7.0              pyhd8ed1ab_0    conda-forge
nc-time-axis              1.4.1              pyhd8ed1ab_0    conda-forge
ncurses                   6.3                  h7f8727e_2  
nest-asyncio              1.5.6              pyhd8ed1ab_0    conda-forge
netcdf4                   1.6.2                    pypi_0    pypi
nettle                    3.6                  he412f7d_0    conda-forge
networkx                  2.7.1              pyhd8ed1ab_0    conda-forge
notebook                  6.5.2              pyha770c72_1    conda-forge
notebook-shim             0.2.2              pyhd8ed1ab_0    conda-forge
nspr                      4.30                 h9c3ff4c_0    conda-forge
nss                       3.67                 hb5efdd6_0    conda-forge
numba                     0.55.1           py37h51133e4_0  
numcodecs                 0.8.0            py37hcd2ae1e_0    conda-forge
numexpr                   2.7.3            py37hdc94413_0    conda-forge
numpy                     1.21.1           py37h038b26d_0    conda-forge
olefile                   0.46               pyh9f0ad1d_1    conda-forge
openh264                  2.1.1                h780b84a_0    conda-forge
openjpeg                  2.4.0                hb52868f_1    conda-forge
openssl                   1.1.1s               h7f8727e_0  
packaging                 21.3               pyhd8ed1ab_0    conda-forge
pandas                    1.3.5                    pypi_0    pypi
pandoc                    2.19.2               ha770c72_0    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
panel                     0.14.1             pyhd8ed1ab_0    conda-forge
pango                     1.48.7               hb8ff022_0    conda-forge
param                     1.12.2             pyh6c4a22f_0    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
partd                     1.3.0              pyhd8ed1ab_0    conda-forge
patsy                     0.5.3              pyhd8ed1ab_0    conda-forge
pcre                      8.45                 h9c3ff4c_0    conda-forge
pexpect                   4.8.0              pyh1a96a4e_2    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    9.3.0                    pypi_0    pypi
pims                      0.6.1                    pypi_0    pypi
pip                       21.2.2           py37h06a4308_0  
pixman                    0.40.0               h36c2ea0_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_0    conda-forge
pooch                     1.6.0              pyhd8ed1ab_0    conda-forge
poppler                   0.89.0               h2de54a5_5    conda-forge
poppler-data              0.4.11               hd8ed1ab_0    conda-forge
postgresql                13.3                 h2510834_0    conda-forge
proj                      7.2.0                he47e99f_1    conda-forge
prometheus_client         0.15.0             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.32             pyha770c72_0    conda-forge
prompt_toolkit            3.0.32               hd8ed1ab_0    conda-forge
psutil                    5.8.0            py37h5e8e339_1    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pycosat                   0.6.3            py37h27cfd23_0  
pycparser                 2.21               pyhd3eb1b0_0  
pyct                      0.4.6                      py_0    conda-forge
pyct-core                 0.4.6                      py_0    conda-forge
pygments                  2.13.0             pyhd8ed1ab_0    conda-forge
pygmtsar                  2022.11.26               pypi_0    pypi
pyopenssl                 22.0.0             pyhd3eb1b0_0  
pyparsing                 3.0.9              pyhd8ed1ab_0    conda-forge
pyproj                    3.1.0            py37h20b8899_3    conda-forge
pyqt                      5.12.3           py37h89c1867_7    conda-forge
pyqt-impl                 5.12.3           py37he336c9b_7    conda-forge
pyqt5-sip                 4.19.18          py37hcd2ae1e_7    conda-forge
pyqtchart                 5.12             py37he336c9b_7    conda-forge
pyqtwebengine             5.12.1           py37he336c9b_7    conda-forge
pyrsistent                0.18.0           py37heee7806_0  
pyshp                     2.3.1              pyhd8ed1ab_0    conda-forge
pysocks                   1.7.1                    py37_1  
python                    3.7.15               haa1d7c7_0  
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-fastjsonschema     2.16.2             pyhd8ed1ab_0    conda-forge
python_abi                3.7                     2_cp37m    conda-forge
pytz                      2022.6             pyhd8ed1ab_0    conda-forge
pyviz_comms               2.2.1              pyhd8ed1ab_1    conda-forge
pywavelets                1.1.1            py37h902c9e0_3    conda-forge
pyyaml                    5.4.1            py37h5e8e339_0    conda-forge
pyzmq                     19.0.2           py37hac76be4_2    conda-forge
qt                        5.12.9               hda022c4_4    conda-forge
qtconsole                 5.4.0              pyhd8ed1ab_0    conda-forge
qtconsole-base            5.4.0              pyha770c72_0    conda-forge
qtpy                      2.2.1              pyhd8ed1ab_0    conda-forge
rasterio                  1.2.6            py37hd5c4cce_0    conda-forge
readline                  8.1.2                h7f8727e_1  
requests                  2.27.1             pyhd3eb1b0_0  
rioxarray                 0.9.1              pyhd8ed1ab_0    conda-forge
rtree                     1.0.1            py37h0b55af0_0    conda-forge
ruamel_yaml               0.15.100         py37h27cfd23_0  
scikit-image              0.18.2           py37h219a48f_0    conda-forge
scikit-learn              0.24.2           py37h18a542f_0    conda-forge
scipy                     1.7.1            py37hc65b3f8_2  
seaborn                   0.11.2               hd8ed1ab_0    conda-forge
seaborn-base              0.11.2             pyhd8ed1ab_0    conda-forge
send2trash                1.8.0              pyhd8ed1ab_0    conda-forge
sentineleof               0.6.4              pyhd8ed1ab_0    conda-forge
sentinelsat               1.1.1              pyhd8ed1ab_0    conda-forge
setuptools                59.8.0           py37h89c1867_1    conda-forge
shapely                   1.7.1            py37h2d1e849_5    conda-forge
six                       1.16.0             pyhd3eb1b0_1  
sklearn                   0.0                      pypi_0    pypi
slicerator                1.1.0                    pypi_0    pypi
snappy                    1.1.8                he1b5a44_3    conda-forge
sniffio                   1.3.0              pyhd8ed1ab_0    conda-forge
snuggs                    1.4.7                      py_0    conda-forge
sortedcontainers          2.4.0              pyhd8ed1ab_0    conda-forge
soupsieve                 2.3.2.post1        pyhd8ed1ab_0    conda-forge
sqlite                    3.40.0               h5082296_0  
statsmodels               0.9.0           py37h3010b51_1000    conda-forge
tbb                       2021.6.0             hdb19cb5_0  
tblib                     1.7.0              pyhd8ed1ab_0    conda-forge
terminado                 0.17.0             pyh41d4057_0    conda-forge
threadpoolctl             3.1.0              pyh8a188c0_0    conda-forge
tifffile                  2021.4.8           pyhd8ed1ab_0    conda-forge
tiledb                    2.2.9                h91fcb0e_0    conda-forge
tinycss2                  1.2.1              pyhd8ed1ab_0    conda-forge
tk                        8.6.12               h1ccaba5_0  
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
toolz                     0.12.0             pyhd8ed1ab_0    conda-forge
tornado                   6.1              py37h5e8e339_1    conda-forge
tqdm                      4.64.1             pyhd8ed1ab_0    conda-forge
traitlets                 5.5.0              pyhd8ed1ab_0    conda-forge
typing_extensions         4.4.0              pyha770c72_0    conda-forge
tzcode                    2021a                h7f98852_2    conda-forge
tzdata                    2022f                h191b570_0    conda-forge
urllib3                   1.26.8             pyhd3eb1b0_0  
wcwidth                   0.2.5              pyh9f0ad1d_2    conda-forge
webencodings              0.5.1                      py_1    conda-forge
websocket-client          1.4.2              pyhd8ed1ab_0    conda-forge
wheel                     0.37.1             pyhd3eb1b0_0  
widgetsnbextension        4.0.3              pyhd8ed1ab_0    conda-forge
x264                      1!161.3030           h7f98852_1    conda-forge
xarray                    0.19.0             pyhd8ed1ab_1    conda-forge
xerces-c                  3.2.3                h9d8b166_2    conda-forge
xmltodict                 0.13.0             pyhd8ed1ab_0    conda-forge
xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
xorg-libice               1.0.10               h7f98852_0    conda-forge
xorg-libsm                1.2.3             hd9c2040_1000    conda-forge
xorg-libx11               1.7.2                h7f98852_0    conda-forge
xorg-libxau               1.0.9                h7f98852_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xorg-libxext              1.3.4                h7f98852_1    conda-forge
xorg-libxrender           0.9.10            h7f98852_1003    conda-forge
xorg-libxt                1.2.1                h7f98852_2    conda-forge
xorg-renderproto          0.11.1            h7f98852_1002    conda-forge
xorg-xextproto            7.3.0             h7f98852_1002    conda-forge
xorg-xproto               7.0.31            h7f98852_1007    conda-forge
xyzservices               2022.9.0           pyhd8ed1ab_0    conda-forge
xz                        5.2.6                h5eee18b_0  
yaml                      0.2.5                h7b6447c_0  
zarr                      2.12.0             pyhd8ed1ab_0    conda-forge
zeromq                    4.3.4                h9c3ff4c_1    conda-forge
zfp                       0.5.5                h9c3ff4c_5    conda-forge
zict                      2.2.0              pyhd8ed1ab_0    conda-forge
zipp                      3.10.0             pyhd8ed1ab_0    conda-forge
zlib                      1.2.13               h5eee18b_0  
zstd                      1.4.9                ha95c52a_0    conda-forge

Project tree shown below:

~/PyGMTSAR/exa4$ tree -L 2
.
├── raw_orig
│   ├── 20220109_manifest.safe
│   ├── 20220202_manifest.safe
│   ├── 20220226_manifest.safe
│   ├── 20220322_manifest.safe
│   ├── 20220415_manifest.safe
│   ├── 20220509_manifest.safe
│   ├── 20220602_manifest.safe
│   ├── 20220626_manifest.safe
│   ├── 20220720_manifest.safe
│   ├── 20220813_manifest.safe
│   ├── 20220906_manifest.safe
│   ├── 20220930_manifest.safe
│   ├── 20221024_manifest.safe
│   ├── 20221105_manifest.safe
│   ├── s1a-iw2-slc-vv-20220109t103403-20220109t103428-041383-04eb92-005.tiff
│   ├── s1a-iw2-slc-vv-20220109t103403-20220109t103428-041383-04eb92-005.xml
│   ├── s1a-iw2-slc-vv-20220202t103402-20220202t103427-041733-04f74c-005.tiff
│   ├── s1a-iw2-slc-vv-20220202t103402-20220202t103427-041733-04f74c-005.xml
│   ├── s1a-iw2-slc-vv-20220226t103402-20220226t103427-042083-05036e-005.tiff
│   ├── s1a-iw2-slc-vv-20220226t103402-20220226t103427-042083-05036e-005.xml
│   ├── s1a-iw2-slc-vv-20220322t103402-20220322t103427-042433-050f51-005.tiff
│   ├── s1a-iw2-slc-vv-20220322t103402-20220322t103427-042433-050f51-005.xml
│   ├── s1a-iw2-slc-vv-20220415t103402-20220415t103428-042783-051b28-005.tiff
│   ├── s1a-iw2-slc-vv-20220415t103402-20220415t103428-042783-051b28-005.xml
│   ├── s1a-iw2-slc-vv-20220509t103404-20220509t103429-043133-0526bc-005.tiff
│   ├── s1a-iw2-slc-vv-20220509t103404-20220509t103429-043133-0526bc-005.xml
│   ├── s1a-iw2-slc-vv-20220602t103406-20220602t103431-043483-05311f-005.tiff
│   ├── s1a-iw2-slc-vv-20220602t103406-20220602t103431-043483-05311f-005.xml
│   ├── s1a-iw2-slc-vv-20220626t103407-20220626t103432-043833-053b9d-005.tiff
│   ├── s1a-iw2-slc-vv-20220626t103407-20220626t103432-043833-053b9d-005.xml
│   ├── s1a-iw2-slc-vv-20220720t103409-20220720t103434-044183-054610-005.tiff
│   ├── s1a-iw2-slc-vv-20220720t103409-20220720t103434-044183-054610-005.xml
│   ├── s1a-iw2-slc-vv-20220813t103410-20220813t103435-044533-055092-005.tiff
│   ├── s1a-iw2-slc-vv-20220813t103410-20220813t103435-044533-055092-005.xml
│   ├── s1a-iw2-slc-vv-20220906t103411-20220906t103437-044883-055c68-005.tiff
│   ├── s1a-iw2-slc-vv-20220906t103411-20220906t103437-044883-055c68-005.xml
│   ├── s1a-iw2-slc-vv-20220930t103412-20220930t103437-045233-056820-005.tiff
│   ├── s1a-iw2-slc-vv-20220930t103412-20220930t103437-045233-056820-005.xml
│   ├── s1a-iw2-slc-vv-20221024t103412-20221024t103437-045583-057334-005.tiff
│   ├── s1a-iw2-slc-vv-20221024t103412-20221024t103437-045583-057334-005.xml
│   ├── s1a-iw2-slc-vv-20221105t103411-20221105t103437-045758-05791b-005.tiff
│   ├── s1a-iw2-slc-vv-20221105t103411-20221105t103437-045758-05791b-005.xml
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220105T121555_V20211215T225942_20211217T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220129T121556_V20220108T225942_20220110T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220222T081603_V20220201T225942_20220203T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220318T081639_V20220225T225942_20220227T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220411T081600_V20220321T225942_20220323T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220505T081715_V20220414T225942_20220416T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220529T082109_V20220508T225942_20220510T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220622T081913_V20220601T225942_20220603T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220716T081922_V20220625T225942_20220627T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220809T081813_V20220719T225942_20220721T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220902T081914_V20220812T225942_20220814T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20220926T081722_V20220905T225942_20220907T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20221020T081824_V20220929T225942_20221001T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20221113T081748_V20221023T225942_20221025T005942.EOF
│   ├── S1A_OPER_AUX_POEORB_OPOD_20221125T081749_V20221104T225942_20221106T005942.EOF
│   ├── S1A_OPER_AUX_RESORB_OPOD_20221024T142035_V20221024T102810_20221024T134540.EOF
│   └── S1A_OPER_AUX_RESORB_OPOD_20221105T141804_V20221105T102809_20221105T134539.EOF
├── S1A_Stack_CPGF_T173.ipynb
└── topo
    └── DEM_WGS84.nc

Notebooks: S1A_Stack_CPGF_T173_pygmtsar_v20221126.tar.gz and S1A_Stack_CPGF_T173_pygmtsar_v202210116.tar.gz

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AlexeyPechnikov avatar AlexeyPechnikov commented on June 16, 2024

There is no the used scenes list to download the dataset (like to S1A_IW_SLC__1SDV_20171111T150004_20171111T150032_019219_0208AF_EE89.zip). Could you share the scenes names to download or the raw_orig folder content?

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spacefan avatar spacefan commented on June 16, 2024

https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20221105T103411_20221105T103438_045758_05791B_0A1F.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20221024T103411_20221024T103439_045583_057334_671E.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220930T103411_20220930T103439_045233_056820_DE54.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220906T103411_20220906T103438_044883_055C68_ED18.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220813T103409_20220813T103437_044533_055092_FF19.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220720T103408_20220720T103435_044183_054610_0167.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220626T103406_20220626T103434_043833_053B9D_4D28.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220602T103405_20220602T103433_043483_05311F_E254.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220509T103403_20220509T103431_043133_0526BC_2CC7.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220415T103402_20220415T103429_042783_051B28_0254.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220322T103401_20220322T103429_042433_050F51_9CD3.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220226T103401_20220226T103429_042083_05036E_68A0.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220202T103401_20220202T103429_041733_04F74C_90AF.zip
https://datapool.asf.alaska.edu/SLC/SA/S1A_IW_SLC__1SDV_20220109T103402_20220109T103430_041383_04EB92_8443.zip

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AlexeyPechnikov avatar AlexeyPechnikov commented on June 16, 2024

Ok, so the list is

S1A_IW_SLC__1SDV_20221105T103411_20221105T103438_045758_05791B_0A1F
S1A_IW_SLC__1SDV_20221024T103411_20221024T103439_045583_057334_671E
S1A_IW_SLC__1SDV_20220930T103411_20220930T103439_045233_056820_DE54
S1A_IW_SLC__1SDV_20220906T103411_20220906T103438_044883_055C68_ED18
S1A_IW_SLC__1SDV_20220813T103409_20220813T103437_044533_055092_FF19
S1A_IW_SLC__1SDV_20220720T103408_20220720T103435_044183_054610_0167
S1A_IW_SLC__1SDV_20220626T103406_20220626T103434_043833_053B9D_4D28
S1A_IW_SLC__1SDV_20220602T103405_20220602T103433_043483_05311F_E254
S1A_IW_SLC__1SDV_20220509T103403_20220509T103431_043133_0526BC_2CC7
S1A_IW_SLC__1SDV_20220415T103402_20220415T103429_042783_051B28_0254
S1A_IW_SLC__1SDV_20220322T103401_20220322T103429_042433_050F51_9CD3
S1A_IW_SLC__1SDV_20220226T103401_20220226T103429_042083_05036E_68A0
S1A_IW_SLC__1SDV_20220202T103401_20220202T103429_041733_04F74C_90AF
S1A_IW_SLC__1SDV_20220109T103402_20220109T103430_041383_04EB92_8443

I'm downloading the dataset.

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AlexeyPechnikov avatar AlexeyPechnikov commented on June 16, 2024

The problem fixed in PyPI library 2022.12.1, please check.

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spacefan avatar spacefan commented on June 16, 2024

Great work! Issue closed.

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