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api

Repository for version control of the BrAPI specifications

araclim

Description of the local Environment in Arabidopsis

autocomplete

bamtools

C++ API & command-line toolkit for working with BAM data

binary-search-bounds

Better binary searching

cmpbitvec

coexpression

d4g-hackathon-malaria-viz

Malaria in Kenya (counties) - Data exploration with D3 using parallel coordinates + map + grid

dalliance

Interactive web-based genome browser.

eg-web-common

modules/files required to set up any of the EG genome browsers

express-static

express-static

fastbit

node interface to (some) FastBit C++ functions

fastx_toolkit

FASTA/FASTQ pre-processing programs

figue

Automatically exported from code.google.com/p/figue

genetrees

API for gene trees

genome-viz

gramene-bins-client

Provide convenient API for working with gene distribution bins provided by data.gramene.org/genes

gramene-genetree-vis

React client-side vis for Compara gene tree

gramene-mongodb

Gramene's MongoDB. ETL code

gramene-search-client

Javascript client for searching Gramene's API

gramene-search-vis

Visualizations used in gramene-search

gramene-taxonomy-d3-example

gramoogle

Gramene Search Interface

graphene-loader

populate a neo4j graph database from data.gramene.org and the reactome

hello-flask

ini

An ini parser/serializer in JavaScript

litter_getter

Retrieve literature from biomedical reference libraries such as PubMed, EPA's HERO, and imports from Endnote RIS exports

msa-fonts

A collection of multi-colored fonts for use in multiple sequence alignments

neo4j_ontologies

parallel-coordinates

A d3-based parallel coordinates plot in canvas.