ahorvath Goto Github PK

2019_doan_pnas

Label-free assessment of red blood cell storage lesions by deep learning

biochemistry_2022

bioinfo-libs

C library with bioinformatic formats parser and aligners

bioinformatics_scripts

cnv_pipeline

common-libs

C library with common utilities

dancer

The easiest way to write web applications with Perl (Perl web micro-framework)

deep_learning

deep_learning_examples

Examples of using deep learning in Bioinformatics

dictyostelium

dlink

Deep Learning with Keras and TensorFlow

ferrin_elife_2017

Code for Reproduction of Published Figures

genoviewer

A genome browser for NGS data analysis

horvath_et_al_2018_pu.1

horvath_et_al_2019_labelled_enhancers

This repository contains the most important in-house scripts for Horvath et al. Labelled enhancers are pervasive features of the macrophage genome and are dynamically utilized upon classical and alternative polarization (2019)

hpg-variant

hung_and_horvath_et_al_2023

This repository contains R and bash scripts for Hung & Horvath et al. 2023 on the closed-loop formation propensity of mRNAs in the budding yeast transcriptome.

improved_wgan_training

Code for reproducing experiments in "Improved Training of Wasserstein GANs"

irfinder

Detecting intron retention from RNA-Seq experiments

jflow

Cover Flow for Java Swing

kentutils

UCSC command line bioinformatic utilities

knot_pull

Python module for knot-like structure detection in biological molecules

krakenuniq

🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results

medstuff

metagenomicdc

mirnaprimerdesigntool

nanogenmo.github.io

NaNoGenMo

nanogenmo2016

Paranoid Thriller Generator, Entry for NaNoGenMo2016

openmm-polymer-legacy

A legacy repository. Was replaced by polychrom.

pear

Pair-End AssembeR