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Name: Hazel Dilmore
Type: User
Bio: PhD Candidate @ Knight Lab, UCSD 🦠
Location: San Diego, CA
Name: Hazel Dilmore
Type: User
Bio: PhD Candidate @ Knight Lab, UCSD 🦠
Location: San Diego, CA
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modifications to kalen's amplicon GPT to adapt for classifier use
Code for analyses for BEAM manuscript
Robust Aitchison PCA from sparse count data
Emperor a tool for the analysis and visualization of large microbial ecology datasets
A fast and scalable phylogenetic tree viewer for microbiome data analysis
Gemelli is a toolbox for running both Robust Aitchison PCA (RPCA) and Compositional Tensor Factorization (CTF) on sparse compositional omics datasets.
Constructs per-gene phylogenetic trees from [meta]genomic sequencing data enabling calculation of UniFrac distance across multiple gene histories.
Outlines for running birdman
Jupyter notebooks to assist with sample processing
resources from my multi-omics code review presentation :)
Jupyter notebooks and data for PTHS manuscript
QIIME 2 plugin wrapping DADA2
QIIME 2 plugin supporting operations on feature tables.
Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
Official QIIME 1 software repository. QIIME 2 (https://qiime2.org) has succeeded QIIME 1 as of January 2018.
Import qiime2 artifacts to R
Visualize differentially ranked features (taxa, metabolites, ...) and their log-ratios across samples
Vanilla regression methods for microbiome differential abundance analysis
Code to generate figures for Tulsa manusript
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.