Abraham Nunes's Projects
My Jekyll blog
Dentate gyrus network model pattern separation and granule cell scaling in epilepsy (Yim et al 2015)
My personal utility belt with functions I use commonly.
Tutorials for CSCI 4181/6802 at Dalhousie University. Currently listing tutorials for winter term 2018.
Code at data for "The architecture of co-morbidity networks of physical and mental health conditions in military veterans", Proceedings of the Royal Society A, 2020
Choo-choo
Code for `The Importance of Constraint Smoothness for Parameter Estimation in Computational Cognitive Modeling`
A package for simulation-based criticism of machine-learning models.
A Julia package for probability distributions and associated functions.
Python/PyMC3 versions of the programs described in Doing bayesian data analysis by John K. Kruschke
A probabilistic programming language in TensorFlow. Deep generative models, variational inference.
Tools for computational psychiatry research.
A toolbox for computational psychiatry
Analytical tools for genomics data in Python 3+.
Evolve synthetic data for machine learning on genomic data.
An Introduction to Deep Generative Modeling: Examples
More SageMath Tutorials: A place to share and evolve tutorials for Sage, with the aim to contribute them to Sage
Mnemonic Similarity Task
Tutorials on processing neuroimaging data with Python
Neurosynth core tools
An implementation of logistic regression with the Newton-Raphson method.
Jupyter notebooks for the Natural Language Processing with Transformers book
Padamsey*, Katsanevaki, Dupuy and Rochefort*
A collection of experimental paradigms.
Publication quality plots in matlab