Comments (4)
Original comment by Bjoern Forsberg (Bitbucket: bforsbe, GitHub: bforsbe):
Ah, that clears it up. Your suggestion makes sense.
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Original comment by Mazbit (Bitbucket: Mazbit, GitHub: Unknown):
Hi Bjoern,
if the inputs are really bad, MOTIONCORR won't spit out a corrected image with or without wrapper. It's a cheap way for reducing a dataset right at the beginning. But Gctf won't run and report an error if some of its inputs (ie corrected micrographs) are missing. Therefore, it could be better to create the micrographs_corrected.star file by reading in MOTIONCORR outputs.
cheers
Mazdak
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Original comment by Bjoern Forsberg (Bitbucket: bforsbe, GitHub: bforsbe):
Hi Mazdak,
So this is something which does not happen when you run MOTIONCORR without the use of RELION?
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The current wrapper should handle this.
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